Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015947370.1_cds_XP_016489127.1_79687
CDS Infomation

[gene=LOC107809048] [db_xref=GeneID:107809048] [protein=methyltransferase-like protein 1] [protein_id=XP_016489127.1] [location=join(19101..21518,21750..21833,22032..22136,22226..22334,23237..23388,23845..24237)] [gbkey=CDS]
Sequence

ATGACTTCCCCTGAACGACTTAGGAGTTATCTGAAACAGGAGGACCAAGACTTAAAATTT
GATGACGACTGGGAAGGGGATGATAAGAGAAAATACAGGTCAAGTAAGTCAAGGTCTGGG
AACAGCGAAGAAGCTGAAGGTTTAGATAGTAATGGAAGAAGGAGAAGTATTGTGGACAGA
AATGAGAGTCGGAAAAGATCAGGTGGATCAAGCAAAGCTGATGTTGATGAGGATGACTAT
GAGGCCGAAAAGGACTCCCGTTCTAAGATGAAGAAGAAGCAGGGGGAGAATACATTGGAG
ACGTTGAGCAATTGGTATCAGGATGGAGAACTTGGGGGCAAGTATGAAAATGGAGACAAA
ACAGGGGTTAGAGGAGAAATCCTATCTAATGAAAGTGTCAGAAGGAAATCAACTTCAAGG
TTTTCTGATGGTGATGGTTCCCAGACAAGAAATAAAGGTAAAAATGAAAAGCTACATGGT
GGGGACTCTGAAAATGCGCTGGAAAGGGATTCTCGACGTTTGGAAAGAAAGGAAAGCGCC
AGAGAAAAGGGTCATGTGCTGTTGGACAGCCTTAAAGATCCAATTGGAGACAAAAATGAT
AAATACCCAGACAGTGACGAGAGAAAGATTGACTGCGATAGGAGTAAGAGAGGCAGATTG
TATGCTACGGAGGAAGACAATGGAGGAAATGTTCCTATACGGGAAGATAAATTGGGTGTG
GAGAGATTTGAGGAGCTTAGACAGCTAAAAAGTGCCACAAGTCACGACGTGGCTGACAGC
CTTGAAAGGTCTGTGGTAGCAGGTGATGATGTCAGCTTAGGGGTGAGAGAGAGAAATAGG
AGAGAGATAGACTACTCTGATAGGTCCAGGACACCTGAGAGGAGTGGAAGGCATCATTAC
GACTCAGAAAACGTTGAGATGGAATATGAAAAAAGAGATACTTTCAGAAGGAAAGAACAA
GAAAAAAATGGTGTAAGAGATGATAAATCAAAAGGAAGGGATGATGGCTGGAGTGATAGA
AACAGAGTTCGGGATGGTTCTAAAGATGGGTGGAAAAGAAGGCAAGGGAACTTTGTTGAC
AAGGAAATAAAAGAAGAAACACCTTATGAACATGGCAGAGAGTGGGAAATGCCCAGACGT
GGTTGGATTGACAATGAAAGGCCTCGTTCTGGTGGTAGAAAAGATGGAAATAGGACAGAA
GCTTTGAAAACTTCATCAAAATATGGAATTTCAAATGAGAATTATGATGTCATAGAGATC
CAAACCAGGCCATTTGACTATGGTAGGGAGGAGGCCATATCTTCCGTAGCAAGAACAACA
AAGTTTAACCAGAATTCTGATGCAAGATTGCCTCCAGATGATGAGAACTGTGCCTTTCCC
AGGGATGGCAGGGGAAGAAACATGACTTGGCTAGCCCAATCTGGCCAAGATTTAAAGGAT
ACATCAGGTGATGGTTCATATAGGGATGAGACTGAATCAAGGGCCCAGAAAGGAGATGCA
TGGGGCCAAACTTCCAATAGTGGTTCAGAACCTCCATATGGGAACCAAGAACCAACTTCG
TTCAATAGAGCTGTTCCAATAGGTTCTAAAGGAAGTAGGGTTGGGAGAGGAGGAAGAGGG
AGGCCTACAGGAAGGGATGGCCACCAGTTCGGACCTCCAATGCCAATGATGGGATCACCT
TTTGGACCACTTGGAATGCCATCGCCTGGATCTGTGCAATCTTTAGCTCCTAACATGTCA
CCTGCTCCAGGCCCTCCTATGTCCCCTGGTGTTTTCATTCCTCCATTTTCACCTCCTGTG
CTTTGGCCTGGAGCCCGAGCTGTTGAGATGAATATGCTAGGTGTTCCACCTGGACTCCCA
CCTGTTCTGCCTGGAACTGGATTTCCCCCTAATTTGGGGAATCTGCCAAATCATGCTATG
TTTTTTAATCAACCAGGCCCTGGAAGAGGGGCACCACCTAACATGTCTGGCTCAAATTTT
AGTGTCCTAATACCAGCAGGTCGGGGACAGGCTCAAGATGAAGCTAATGGAGGTTGGGTT
CCTCCTCGAACTAATGCACCACCTGGCAAAGCTCCTTCTAGGGGTGAGCAGAATGATTAC
TCCCAAAATTTTGTAGATACTGGCACGAGGCCTCAAAATTTCATCAGGGAACTAGAGCTT
ACCAGTGTTGTTGAGGACTATCCCAAACTTCGAGAACTTATTCAAAGGAAGGATGAGATT
GTTGTCAAATCTGCTTCGCCTCCCATGTATTACAAATGTGATCTGCTTGAGCAGGAGCTC
TCCCCGGAGTTTTTTGGGACCAAATTTGATGTCATTCTAATAGACCCCCCATGGGAGGAA
TATGTTCATCGAGCTCCTGGTGTCACTGACCATATGGCGTACTGGACATTTGAGGAAATA
ATGAATCTCAAAATTGAGGCAATTGCTGACACTCCATCATTTGTTTTCCTTTGGGTTGGT
GATGGTGTGGGGCTTGAGCAAGGGCGTCAATGTCTGAAAAAGTGGGGATTCCGCAGGTGT
GAGGACATATGTTGGGTGAAAACAAATAAAACCAATGCAACTCCAGGACTACGGCATGAT
TCCCATACTTTATTTCAGCGTTCAAAGGAGCACTGCCTTTTGGGTATAAGAGGAACTGTT
CGCCGTAGTACGGATGGCCATATAATTCATGCAAATATTGACACAGATGTGATTATTGCC
GAAGAACCTCCTTATGGTTCAAGTGCAAAGCCGGAAGATATGTACCGTATAATTGAGCAT
TTTGCACTTGGCCGGAGAAGGCTTGAGCTCTTTGGCGAAGACCATAATATTCGATCTGGC
TGGTTGACTGTTGGTAAAGGGTTATCTTCATCAAACTTCAGTGCAGAGGCCTATGTGCGA
AATTTTGCCGATAGGGATGGAAAAGTCTGGCAGGGAGGGGGAGGAAGGAATCCACCACCG
GACGCCCCACATCTTGTTACTACAACACCTGAAATAGAGGCTCTTCGGCCCAAGTCGCCA
ATGAAGAATCAGCAGCAAATGCAGCAACAGTCAGCATCTATATCTCTGACAACAACCAAC
TCTTCCAACAAGCGGGCAGCCGGGAACACAGACCAGAATAACAACTCACAAAACGTGAAC
CAAGAAGCCTCTAGCTCTAACGCTTCGAATCCAGGTCCTTGGGTTTCACAAATGGAGAGT
TTTCAAGGGAGAGAGGGTGGACATATGATTTCAGATGATAGGCTTTTTGACATGTACGGA
TACAATGCAGCCTTTAGATAG

Peptide Sequence

PEP ID

XP_016489127.1
PEP Infomation

PREDICTED: methyltransferase-like protein 1 [Nicotiana tabacum]
Sequence

MTSPERLRSYLKQEDQDLKFDDDWEGDDKRKYRSSKSRSGNSEEAEGLDSNGRRRSIVDR
NESRKRSGGSSKADVDEDDYEAEKDSRSKMKKKQGENTLETLSNWYQDGELGGKYENGDK
TGVRGEILSNESVRRKSTSRFSDGDGSQTRNKGKNEKLHGGDSENALERDSRRLERKESA
REKGHVLLDSLKDPIGDKNDKYPDSDERKIDCDRSKRGRLYATEEDNGGNVPIREDKLGV
ERFEELRQLKSATSHDVADSLERSVVAGDDVSLGVRERNRREIDYSDRSRTPERSGRHHY
DSENVEMEYEKRDTFRRKEQEKNGVRDDKSKGRDDGWSDRNRVRDGSKDGWKRRQGNFVD
KEIKEETPYEHGREWEMPRRGWIDNERPRSGGRKDGNRTEALKTSSKYGISNENYDVIEI
QTRPFDYGREEAISSVARTTKFNQNSDARLPPDDENCAFPRDGRGRNMTWLAQSGQDLKD
TSGDGSYRDETESRAQKGDAWGQTSNSGSEPPYGNQEPTSFNRAVPIGSKGSRVGRGGRG
RPTGRDGHQFGPPMPMMGSPFGPLGMPSPGSVQSLAPNMSPAPGPPMSPGVFIPPFSPPV
LWPGARAVEMNMLGVPPGLPPVLPGTGFPPNLGNLPNHAMFFNQPGPGRGAPPNMSGSNF
SVLIPAGRGQAQDEANGGWVPPRTNAPPGKAPSRGEQNDYSQNFVDTGTRPQNFIRELEL
TSVVEDYPKLRELIQRKDEIVVKSASPPMYYKCDLLEQELSPEFFGTKFDVILIDPPWEE
YVHRAPGVTDHMAYWTFEEIMNLKIEAIADTPSFVFLWVGDGVGLEQGRQCLKKWGFRRC
EDICWVKTNKTNATPGLRHDSHTLFQRSKEHCLLGIRGTVRRSTDGHIIHANIDTDVIIA
EEPPYGSSAKPEDMYRIIEHFALGRRRLELFGEDHNIRSGWLTVGKGLSSSNFSAEAYVR
NFADRDGKVWQGGGGRNPPPDAPHLVTTTPEIEALRPKSPMKNQQQMQQQSASISLTTTN
SSNKRAAGNTDQNNNSQNVNQEASSSNASNPGPWVSQMESFQGREGGHMISDDRLFDMYG
YNAAFR

Transcript Sequence

Gene sequence data has not been registered.